2019-09-10 fad2d50d4084cd610692123903bbe72cb6abc2fc
2018-11-20 welch16
updated analysis by removing the substudy factor feature. The results appea...
tree@ afa3d2 commitdiff
2018-11-20 welch16
removed test condor submit files to avoid confusions
tree@ c1f3a3 commitdiff
2018-11-15 welch16
added explanation to slides
tree@ a46518 commitdiff
2018-11-14 welch16
prior results of RFEST
tree@ 545c52 commitdiff
2018-11-14 welch16
added commands to run rfest separated by fold
tree@ 09abf2 commitdiff
2018-11-14 welch16
run again to removed unclass files
tree@ f6fb9d commitdiff
2018-11-14 welch16
removed person_id from feature files
tree@ f7f3c1 commitdiff
2018-11-14 welch16
added gamma = 'auto' option to svm in RFEST_features to avoid warning
tree@ ec4d5a commitdiff
2018-11-14 welch16
changed names for clarity
tree@ f084c7 commitdiff
2018-11-13 welch16
tried to run rfest with condor, all runs failed except possibly two
tree@ 75e67d commitdiff
2018-11-13 welch16
added shuffle options to python codes to fix the low accuracy issue
tree@ ad9690 commitdiff
2018-11-13 welch16
adding more slides and changed priority to have mayo snps first
tree@ 615664 commitdiff
2018-11-13 welch16
added the set of snps that weren't listed in the grant
tree@ 3f0df3 commitdiff
2018-11-12 welch16
removed zero variance and near zero variance features from the test as thos...
tree@ c5f43a commitdiff
2018-11-12 welch16
fixed warnings that appeared due to new python3 versions
tree@ accb6e commitdiff
2018-11-12 welch16
added shuffle step to avoid biases
tree@ cc1558 commitdiff
2018-11-12 welch16
changed bin call at top
tree@ 3892c0 commitdiff
2018-11-12 welch16
changed seed?
tree@ c3774c commitdiff
2018-11-12 welch16
init RFEST commit
tree@ 2b2ca8 commitdiff
2018-11-12 welch16
code to submit multiple condor jobs
tree@ 4d056f commitdiff
2018-11-12 welch16
removed commented plot
tree@ e556ea commitdiff
2018-11-12 welch16
summarized the results of the baseline runs, and performed a screening of a...
tree@ 24f52c commitdiff
2018-11-09 welch16
made most of the python scripts work
tree@ 380010 commitdiff
2018-11-09 welch16
condor command to run all baseline analysis
tree@ c9accc commitdiff
2018-11-09 welch16
changed files to baseline directory
tree@ b0d336 commitdiff
2018-11-09 welch16
added script to save into csv file for rfest run, all group combinations of...
tree@ c9f0c1 commitdiff
2018-11-07 welch16
adding a set of common samples to build datasets
tree@ ca6a6a commitdiff
2018-10-31 welch16
added sys commands to be able to call stuff from command line
tree@ 2608b9 commitdiff
2018-10-29 welch16
separated baseline_analysis scripts into scripts by method to make small co...
tree@ 814638 commitdiff
2018-10-29 welch16
removing copy
tree@ 40f0bf commitdiff
2018-10-29 welch16
first commit from rfest script
tree@ ba616e commitdiff
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